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From: Jack Kamm <jackkamm@gmail.com>
To: "Berry, Charles" <ccberry@health.ucsd.edu>
Cc: "emacs-orgmode@gnu.org" <emacs-orgmode@gnu.org>,
	Dylan Schwilk <dylan@schwilk.org>
Subject: Re: Help debugging R source code block output problem with :session
Date: Tue, 08 Sep 2020 07:51:42 -0700	[thread overview]
Message-ID: <874ko8b9tt.fsf@gmail.com> (raw)
In-Reply-To: <1E0046A6-1FAB-45B5-9B08-68FE1BE98180@health.ucsd.edu>

"Berry, Charles" <ccberry@health.ucsd.edu> writes:

> Also, I wonder if the `:results value' case can be handled in a similar manner, viz. 
>
> -  (let ((tmp-file (org-babel-temp-file "R-")))
> +  (let ((tmp-file (with-current-buffer session (org-babel-temp-file "R-"))))

Yes, if we did that then tmp-file would have a prefix like
"/scp:user@hostname:", and elisp would then know to read the result file
from the remote host.

Before pasting tmp-file into R code, we should also call

(org-babel-process-file-name tmp-file 'noquote)

to remove the tramp prefix when referring to the file from R.


  reply	other threads:[~2020-09-08 14:52 UTC|newest]

Thread overview: 25+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2020-08-28 20:11 Help debugging R source code block output problem with :session Dylan Schwilk
2020-08-29  2:36 ` Jack Kamm
2020-08-29  4:07   ` Dylan Schwilk
2020-08-29  7:24     ` Jack Kamm
2020-08-29 20:35       ` Berry, Charles via General discussions about Org-mode.
2020-08-30  4:37         ` Dylan Schwilk
2020-08-30 15:08         ` Jack Kamm
2020-09-07  8:18         ` Jack Kamm
2020-09-07  8:45           ` Jack Kamm
2020-09-07 17:37             ` Berry, Charles via General discussions about Org-mode.
2020-09-07 20:07               ` Jack Kamm
2020-09-07 22:12                 ` Berry, Charles via General discussions about Org-mode.
2020-09-08  1:06                   ` Jack Kamm
2020-09-08  2:08                     ` Berry, Charles via General discussions about Org-mode.
2020-09-08 14:51                       ` Jack Kamm [this message]
2020-09-08 16:45                         ` Berry, Charles via General discussions about Org-mode.
2020-09-08 17:41                           ` Jack Kamm
2020-09-18 16:39                             ` Dylan Schwilk
2020-10-28 13:13                 ` Jack Kamm
2020-10-28 13:46                   ` Jeremie Juste
2020-08-30  4:18       ` Dylan Schwilk
2021-05-03  8:53       ` Jeremie Juste
  -- strict thread matches above, loose matches on Subject: below --
2022-01-11 23:36 John Hendy
2022-01-12  7:49 ` Jeremie Juste
2022-01-12 15:04   ` John Hendy

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