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From: "Charles C. Berry" <ccberry@ucsd.edu>
To: Vicente Vera <vicentemvp@gmail.com>
Cc: emacs-orgmode <emacs-orgmode@gnu.org>
Subject: Re: Strings converted to numbers in Org table?
Date: Mon, 27 Feb 2017 10:17:03 -0800	[thread overview]
Message-ID: <alpine.OSX.2.20.1702271005160.918@charles-berrys-macbook.local> (raw)
In-Reply-To: <CAMfbzvD806CQrFXq=qkKLqXt6xDpTrtiBZqRdEy94frCS-fkww@mail.gmail.com>

On Mon, 27 Feb 2017, Vicente Vera wrote:

> Hello again, I'm sorry for being noisy.
>
> OK yes, `org-babel-read' is indeed converting "number strings" to
> numbers.
>

[proposed fix deleted]

I don't have a feeling as to whether the proposed fix is appropriate.

However, there are other ways to solve this issue. See below.

>>>
>>> - In R every value is a string. "var2" contains no numbers (is a
>>>   character vector).
>>>
>>> - Upon conversion to a table Org removes the zero from "var2" last
>>>   value.
>>>
>>> ------------------------------
>>>
>>> #+BEGIN_SRC R :session *mwe* :results value table :colnames yes
>>>   tst <- data.frame(var1 = c("a", "b", "c", "d", "e", "f", "g"),
>>>                     var2 = c("150", "210", "140", "150", "192", "497",
>>> "3.350"),
>>>                     stringsAsFactors = FALSE)
>>>   tst
>>> #+END_SRC
>>>
>>> #+RESULTS:
>>> | var1 | var2 |
>>> |------+------|
>>> | a    |  150 |
>>> | b    |  210 |
>>> | c    |  140 |
>>> | d    |  150 |
>>> | e    |  192 |
>>> | f    |  497 |
>>> | g    | 3.35 |
>>>
>>> ------------------------------
>>>
>>> Here's the output as seen in R:
>>>
>>> : > tst
>>> :   var1  var2
>>> : 1    a   150
>>> : 2    b   210
>>> : 3    c   140
>>> : 4    d   150
>>> : 5    e   192
>>> : 6    f   497
>>> : 7    g 3.350
>>>
>>> Details on the data frame:
>>>
>>> : > str(tst)
>>> : 'data.frame':    7 obs. of  2 variables:
>>> :  $ var1: chr  "a" "b" "c" "d" ...
>>> :  $ var2: chr  "150" "210" "140" "150" ...
>>>
>>> It seems Org knows that the values on column "var2" are numbers and
>>> converts the strings to numbers, applying some obscure trimming on the
>>> digits. The "3.350" value needs to be left as is.


IMHO, it is often best to handle formatting of output in the language of 
the src block.  There are some tools for doing this in R: the `ascii' 
package is one. `xtable' is another.

You can always do something like this:

#+BEGIN_SRC R :session *mwe* :results output
  tst <- data.frame(var1 = c("a", "b", "c", "d", "e", "f", "g"),
  var2 = c("150", "210", "140", "150", "192", "497", "3.350"),
  stringsAsFactors = FALSE)

  cat( capture.output( print(tst, row.names=FALSE)), sep="\n")

#+END_SRC


Or you can use `ox-ravel'[1] to convert to one of the knitr-like formats 
and let knitr or rmarkdown handle the output conversion.

Best,

Chuck

[1] https://github.com/chasberry/orgmode-accessories

  parent reply	other threads:[~2017-02-27 18:17 UTC|newest]

Thread overview: 7+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2017-02-24  1:40 Strings converted to numbers in Org table? Vicente Vera
2017-02-27 13:49 ` Vicente Vera
2017-02-27 15:31   ` Vicente Vera
2017-02-27 17:33     ` Nicolas Goaziou
2017-02-27 19:20       ` Vicente Vera
2017-02-27 18:17     ` Charles C. Berry [this message]
2017-02-28  7:43       ` Alan Schmitt

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